  {"id":179,"date":"2023-03-07T10:16:45","date_gmt":"2023-03-07T15:16:45","guid":{"rendered":"https:\/\/www.yorku.ca\/science\/lab\/pengdev\/?page_id=179"},"modified":"2023-03-21T10:30:41","modified_gmt":"2023-03-21T14:30:41","slug":"bioinformatics-tools","status":"publish","type":"page","link":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/","title":{"rendered":"Bioinformatics tools"},"content":{"rendered":"\n<div style=\"height:24px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n\n\n\n<p>This page contains relevant code used to predict FOXA2 DNA binding sites and analysis of TCGA data for the publication:&nbsp;<strong>MicroRNA-590-3p promotes ovarian cancer growth and metastasis via a novel FOXA2-Versican pathway.&nbsp;<\/strong><\/p>\n\n\n\n<p><a href=\"http:\/\/peng.lab.yorku.ca\/files\/2018\/01\/TCGADataAggregation.zip?x28124\">TCGA Data Aggregation C++ file<\/a><\/p>\n\n\n\n<p><a href=\"http:\/\/peng.lab.yorku.ca\/files\/2018\/01\/ConSeqSearch.zip?x28124\">Consensus sequence string search C++ files<\/a><\/p>\n\n\n\n<div style=\"height:350px\" aria-hidden=\"true\" class=\"wp-block-spacer\"><\/div>\n","protected":false},"excerpt":{"rendered":"<p>This page contains relevant code used to predict FOXA2 DNA binding sites and analysis of TCGA data for the publication:&nbsp;MicroRNA-590-3p promotes ovarian cancer growth and metastasis via a novel FOXA2-Versican pathway.&nbsp; TCGA Data Aggregation C++ file Consensus sequence string search C++ files<\/p>\n","protected":false},"author":45,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_kad_blocks_custom_css":"","_kad_blocks_head_custom_js":"","_kad_blocks_body_custom_js":"","_kad_blocks_footer_custom_js":"","footnotes":""},"tags":[],"class_list":["post-179","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.4 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Bioinformatics tools - Peng Lab<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Bioinformatics tools - Peng Lab\" \/>\n<meta property=\"og:description\" content=\"This page contains relevant code used to predict FOXA2 DNA binding sites and analysis of TCGA data for the publication:&nbsp;MicroRNA-590-3p promotes ovarian cancer growth and metastasis via a novel FOXA2-Versican pathway.&nbsp; TCGA Data Aggregation C++ file Consensus sequence string search C++ files\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/\" \/>\n<meta property=\"og:site_name\" content=\"Peng Lab\" \/>\n<meta property=\"article:modified_time\" content=\"2023-03-21T14:30:41+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\\\/\\\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/bioinformatics-tools\\\/\",\"url\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/bioinformatics-tools\\\/\",\"name\":\"Bioinformatics tools - Peng Lab\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/#website\"},\"datePublished\":\"2023-03-07T15:16:45+00:00\",\"dateModified\":\"2023-03-21T14:30:41+00:00\",\"breadcrumb\":{\"@id\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/bioinformatics-tools\\\/#breadcrumb\"},\"inLanguage\":\"en-CA\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/bioinformatics-tools\\\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/bioinformatics-tools\\\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Bioinformatics tools\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/#website\",\"url\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/\",\"name\":\"Peng Lab\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\\\/\\\/www.yorku.ca\\\/science\\\/lab\\\/peng\\\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-CA\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Bioinformatics tools - Peng Lab","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/","og_locale":"en_US","og_type":"article","og_title":"Bioinformatics tools - Peng Lab","og_description":"This page contains relevant code used to predict FOXA2 DNA binding sites and analysis of TCGA data for the publication:&nbsp;MicroRNA-590-3p promotes ovarian cancer growth and metastasis via a novel FOXA2-Versican pathway.&nbsp; TCGA Data Aggregation C++ file Consensus sequence string search C++ files","og_url":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/","og_site_name":"Peng Lab","article_modified_time":"2023-03-21T14:30:41+00:00","twitter_card":"summary_large_image","twitter_misc":{"Est. reading time":"1 minute"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"WebPage","@id":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/","url":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/","name":"Bioinformatics tools - Peng Lab","isPartOf":{"@id":"https:\/\/www.yorku.ca\/science\/lab\/peng\/#website"},"datePublished":"2023-03-07T15:16:45+00:00","dateModified":"2023-03-21T14:30:41+00:00","breadcrumb":{"@id":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/#breadcrumb"},"inLanguage":"en-CA","potentialAction":[{"@type":"ReadAction","target":["https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/www.yorku.ca\/science\/lab\/peng\/bioinformatics-tools\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Home","item":"https:\/\/www.yorku.ca\/science\/lab\/peng\/"},{"@type":"ListItem","position":2,"name":"Bioinformatics tools"}]},{"@type":"WebSite","@id":"https:\/\/www.yorku.ca\/science\/lab\/peng\/#website","url":"https:\/\/www.yorku.ca\/science\/lab\/peng\/","name":"Peng Lab","description":"","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/www.yorku.ca\/science\/lab\/peng\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-CA"}]}},"taxonomy_info":[],"featured_image_src_large":false,"author_info":{"display_name":"gotcheva","author_link":"https:\/\/www.yorku.ca\/science\/lab\/peng\/author\/gotcheva\/"},"comment_info":0,"_links":{"self":[{"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/pages\/179","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/users\/45"}],"replies":[{"embeddable":true,"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/comments?post=179"}],"version-history":[{"count":4,"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/pages\/179\/revisions"}],"predecessor-version":[{"id":311,"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/pages\/179\/revisions\/311"}],"wp:attachment":[{"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/media?parent=179"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.yorku.ca\/science\/lab\/peng\/wp-json\/wp\/v2\/tags?post=179"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}